BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012H08SP1|AL426436
(605 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1792 958 0.0
>3x_Contig1792
Length = 28468
Score = 958 bits (474), Expect = 0.0
Identities = 546/585 (93%)
Strand = Plus / Minus
Query: 1 atantatttagatagaaataattttctgaagtcatcattgctcaactttttgtcattttg 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8216 atattatttagatagaaataattttctgaagtcatcattgctcaactttttgtcattttg 8157
Query: 61 tgacgcttgctgtgatttaatttcctttacaacagcgtgctttggttgattcaaggktgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8156 tgacgcttgctgtgatttaatttcctttacaacagcgtgctttggttgattcaaggttgt 8097
Query: 121 tttgtgttcattgggataatgaagggaaagttcatgagcagaaacacatttcaaaattcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8096 tttgtgttcattgggataatgaagggaaagttcatgagcagaaacacatttcaaaattcg 8037
Query: 181 gttcttgaacttgtatccattgattgcvagtgaaacttttgcggkaattgcbtctttgtc 240
||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 8036 gttcttgaacttgtatccattgattgcaagtgaaacttttgcggtaattgcttctttgtc 7977
Query: 241 cgcbattatbaaagcaccttcatgatcagagaccagcaaaaccttcgtaatatccggagg 300
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7976 cgctattattaaagcaccttcatgatcagagaccagcaaaaccttcgtaatatccggagg 7917
Query: 301 tctaakttgagctttctccgtaatgaaagcmagaatttgabcsgggggaatcbgatcaga 360
||||| |||||||||||||||||||||||| ||||||||| | |||| |||| |||||||
Sbjct: 7916 tctaatttgagctttctccgtaatgaaagcaagaatttgatctggggtaatctgatcaga 7857
Query: 361 caatgggtatatkccgacaacytttgggttttcttttctggaagcmagcagacgcttcac 420
|||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 7856 caatgggtatattccgacaacttttgggttttcttttctggaagcaagcagacgcttcac 7797
Query: 421 ctcttgtctttcyagataagcctttcccataacctttgamacgtgtaagggcttaccgtt 480
|||||||||||| ||||||||||||| |||||| ||||| |||||||| |||||||||||
Sbjct: 7796 ctcttgtctttctagataagcctttctcataacttttgaaacgtgtaatggcttaccgtt 7737
Query: 481 cattaccgctccatttaakgacaaagcattagcggcacccgccnngnnnnngaangngan 540
|||||||||||||||||| |||||||||||| | |||| ||| | ||| | |
Sbjct: 7736 cattaccgctccatttaatgacaaagcattatctgcactcgctttgtttttgaatgttat 7677
Query: 541 gaacgcatatctggratgtcgtccagggtttgtgtcatcaccagt 585
|||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 7676 gaacgcatatctggaatgtcgtccagggtttgtttcatcaccagt 7632
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3075
Number of Sequences: 1807
Number of extensions: 3075
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 605
length of database: 10,358,551
effective HSP length: 16
effective length of query: 589
effective length of database: 10,329,639
effective search space: 6084157371
effective search space used: 6084157371
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)